This forum attends all concerns of the Java-based MembraneEditor created for the CELLmicrocosmos 2 project.
Post Reply
User avatar
bjoern
Site Admin
Posts: 211
Joined: 20.03.2006, 15:01
Contact:

BugReport

Post by bjoern » 07.07.2006, 09:37

Here you can add all problems occuring during the use of the Cm2 MembraneEditor. Many thanks in advance for you suggestions for improvement!

User avatar
bjoern
Site Admin
Posts: 211
Joined: 20.03.2006, 15:01
Contact:

Post by bjoern » 27.07.2006, 12:45

Amira-Workarounds

pack & go
  • In Amira occur some problems if the File/Save_Network/Amira script and data files (pack & go) is used and large membranes are imported: The original PDBs are recomputed and stored in the directory of the new project.

    When reloading the project, the newly generated PDBs contain errors which lead to a faulty visualization of the membranes.

    To avoid this error, just replace the new Amira generated PDBs in the project directory by the original ones generated by the MembraneEditor.

    Normally, this procedure only have to be accomplished for one time.

    Note: Please be aware of the fact that you should always use the pack & go-function when working with membranes, because otherwise some errors may occur when loading the project.

Post Reply