gui
Class DefaultMutableTreeNodeProtein

java.lang.Object
  javax.swing.tree.DefaultMutableTreeNode
      gui.DefaultMutableTreeNodeProtein

All Implemented Interfaces:

java.io.Serializable, java.lang.Cloneable, javax.swing.tree.MutableTreeNode, javax.swing.tree.TreeNode

public class DefaultMutableTreeNodeProtein
extends javax.swing.tree.DefaultMutableTreeNode

See Also:

Serialized Form

Field Summary

java.lang.String	file
int	min_percent
java.lang.String	nodeName
java.lang.String	pdbName
int	percent
Protein	protein

Fields inherited from class javax.swing.tree.DefaultMutableTreeNode

EMPTY_ENUMERATION

Constructor Summary

DefaultMutableTreeNodeProtein(java.lang.String nodeName, java.lang.String pdbName, int percent)
Creates a node for a protein in the membrane model tree.

Method Summary

java.lang.String	getFile() Returns filepath of the corresponding pdb file of the protein.
int	getMin_percent() Returns the minimal percent value for the protein at the node in lipid membrane.
java.lang.String	getNodeName() Returns the name of the node in the tree.
java.lang.String	getPDBName() Returns the pdb code of the corresponding protein.
int	getPercent() Returns the percent value of the protein in the membrane.
Protein	getProtein() Returns the protein at this node.
void	setFile(java.lang.String file) Sets the filepath of the corresponding pdb file of the protein.
void	setMin_percent(int min_percent) Sets the minimal percent value for the protein at the node in lipid membrane.
void	setNodeName(java.lang.String nodeName) Sets the node name of the node in the tree.
void	setPDBName(java.lang.String name) Sets the pdbname of the corresponding protein object.
void	setPercent(int a) Sets the percent value of the protein in the membrane.
void	setProtein(Protein protein) Sets the protein object to the node.

Methods inherited from class javax.swing.tree.DefaultMutableTreeNode

add, breadthFirstEnumeration, children, clone, depthFirstEnumeration, getAllowsChildren, getChildAfter, getChildAt, getChildBefore, getChildCount, getDepth, getFirstChild, getFirstLeaf, getIndex, getLastChild, getLastLeaf, getLeafCount, getLevel, getNextLeaf, getNextNode, getNextSibling, getParent, getPath, getPreviousLeaf, getPreviousNode, getPreviousSibling, getRoot, getSharedAncestor, getSiblingCount, getUserObject, getUserObjectPath, insert, isLeaf, isNodeAncestor, isNodeChild, isNodeDescendant, isNodeRelated, isNodeSibling, isRoot, pathFromAncestorEnumeration, postorderEnumeration, preorderEnumeration, remove, remove, removeAllChildren, removeFromParent, setAllowsChildren, setParent, setUserObject, toString

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

percent

public int percent

file

public java.lang.String file

pdbName

public java.lang.String pdbName

nodeName

public java.lang.String nodeName

protein

public Protein protein

min_percent

public int min_percent

Constructor Detail

DefaultMutableTreeNodeProtein

public DefaultMutableTreeNodeProtein(java.lang.String nodeName,
                                     java.lang.String pdbName,
                                     int percent)

Creates a node for a protein in the membrane model tree.

Parameters:

nodeName - node name of the protein node.

pdbName - pdb code of the protein node.

percent - percent value of the protein in the membrane.

Method Detail

getPercent

public int getPercent()

Returns the percent value of the protein in the membrane.

Returns:

Returns the percent.

setPercent

public void setPercent(int a)

Sets the percent value of the protein in the membrane.

Parameters:

a - The percent to set.

setFile

public void setFile(java.lang.String file)

Sets the filepath of the corresponding pdb file of the protein.

Parameters:

file - The file to set.

getFile

public java.lang.String getFile()

Returns filepath of the corresponding pdb file of the protein.

Returns:

Returns the file.

setPDBName

public void setPDBName(java.lang.String name)

Sets the pdbname of the corresponding protein object.

Parameters:

name - The name to set.

getPDBName

public java.lang.String getPDBName()

Returns the pdb code of the corresponding protein.

Returns:

Returns pdbName.

setProtein

public void setProtein(Protein protein)

Sets the protein object to the node.

Parameters:

protein - The protein to set.

getProtein

public Protein getProtein()

Returns the protein at this node.

Returns:

Returns the protein.

getNodeName

public java.lang.String getNodeName()

Returns the name of the node in the tree.

Returns:

Returns the nodeName.

setNodeName

public void setNodeName(java.lang.String nodeName)

Sets the node name of the node in the tree.

Parameters:

nodeName - The nodeName to set.

getMin_percent

public int getMin_percent()

Returns the minimal percent value for the protein at the node in lipid membrane.

Returns:

Returns the min_percent.

setMin_percent

public void setMin_percent(int min_percent)

Sets the minimal percent value for the protein at the node in lipid membrane.

Parameters:

min_percent - The min_percent to set.