A B C D E F G H I J K L M N O P R S T U V W X Y Z _

O

officialRelease - Static variable in class org.jmol.viewer.JmolConstants

ok() - Method in class org.openscience.jmol.app.PreferencesDialog

OKPressed() - Method in class org.openscience.jmol.app.AboutDialog

OKPressed() - Method in class org.openscience.jmol.app.HelpDialog

OKPressed() - Method in class org.openscience.jmol.app.WhatsNewDialog

OkStatus - Variable in class org.jmol.jcamp.SaisieDlg

OLIVE - Static variable in class org.jmol.g3d.Graphics3D

OPAQUE - Static variable in class org.jmol.g3d.Graphics3D

openBufferedReader(String, BufferedReader) - Method in class org.jmol.adapter.smarter.SmarterJmolAdapter

openBufferedReader(String, BufferedReader) - Method in class org.jmol.api.JmolAdapter

Associate a clientFile object with a bufferedReader.

openBufferedReader(String, BufferedReader, JmolAdapter.Logger) - Method in class org.jmol.api.JmolAdapter

openBufferedReaders(String[], BufferedReader[]) - Method in class org.jmol.adapter.smarter.SmarterJmolAdapter

openBufferedReaders(String[], BufferedReader[]) - Method in class org.jmol.api.JmolAdapter

Associate a clientFile object with an array of BufferedReader.

openBufferedReaders(String[], BufferedReader[], JmolAdapter.Logger) - Method in class org.jmol.api.JmolAdapter

openClientFile(String, String, Object) - Method in class org.jmol.api.JmolViewer

openClientFile(String, String, Object) - Method in class org.jmol.viewer.Viewer

openDOM(Object) - Method in class org.jmol.api.JmolSimpleViewer

openDOM(Object) - Method in class org.jmol.viewer.Viewer

openDOMReader(Object) - Method in class org.jmol.adapter.smarter.SmarterJmolAdapter

openDOMReader(Object) - Method in class org.jmol.api.JmolAdapter

openDOMReader(Object, JmolAdapter.Logger) - Method in class org.jmol.api.JmolAdapter

openFile(String) - Method in class org.jmol.api.JmolSimpleViewer

openFile(String) - Method in class org.jmol.viewer.Viewer

openFiles(String, String[]) - Method in class org.jmol.viewer.Viewer

openReader(String, String, Reader) - Method in class org.jmol.api.JmolViewer

openReader(String, String, Reader) - Method in class org.jmol.viewer.Viewer

Opens the file, given the reader.

openStringInline(String) - Method in class org.jmol.api.JmolSimpleViewer

openStringInline(String) - Method in class org.jmol.viewer.Viewer

ORANGE - Static variable in class org.jmol.g3d.Graphics3D

ORDER_AROMATIC - Static variable in class org.jmol.api.JmolAdapter

ORDER_COVALENT_DOUBLE - Static variable in class org.jmol.api.JmolAdapter

ORDER_COVALENT_SINGLE - Static variable in class org.jmol.api.JmolAdapter

ORDER_COVALENT_TRIPLE - Static variable in class org.jmol.api.JmolAdapter

ORDER_HBOND - Static variable in class org.jmol.api.JmolAdapter

ORDER_PARTIAL01 - Static variable in class org.jmol.api.JmolAdapter

ORDER_PARTIAL12 - Static variable in class org.jmol.api.JmolAdapter

ORDER_STEREO_FAR - Static variable in class org.jmol.api.JmolAdapter

ORDER_STEREO_NEAR - Static variable in class org.jmol.api.JmolAdapter

org.jmol.adapter.smarter - package org.jmol.adapter.smarter

org.jmol.api - package org.jmol.api

org.jmol.applet - package org.jmol.applet

org.jmol.appletwrapper - package org.jmol.appletwrapper

org.jmol.bspt - package org.jmol.bspt

Provides Binary Space Partitioning Functionality to spacially separate data structures in n-dimensions For some useful background info, search the web for "bsp tree faq".

org.jmol.g3d - package org.jmol.g3d

Provides a software implementation of complete 3D graphics engine for rendering molecules and associated shapes.

org.jmol.i18n - package org.jmol.i18n

org.jmol.jcamp - package org.jmol.jcamp

org.jmol.jcamp.data - package org.jmol.jcamp.data

org.jmol.jcamp.utils - package org.jmol.jcamp.utils

org.jmol.popup - package org.jmol.popup

org.jmol.smiles - package org.jmol.smiles

Provides SMILES parsing Functionality.

org.jmol.util - package org.jmol.util

org.jmol.viewer - package org.jmol.viewer

org.openscience.jmol.app - package org.openscience.jmol.app

orInto(int[], int[]) - Static method in class org.jmol.util.Bmp

OuterIntegration - Class in jmolOutsideApplicationTest

This is only a class for jmol-testing-purposes.

OuterIntegration() - Constructor for class jmolOutsideApplicationTest.OuterIntegration

OuterIntegration(JFrame) - Constructor for class jmolOutsideApplicationTest.OuterIntegration

OV - Static variable in class org.jmol.g3d.Xyzd

OV3 - Static variable in class org.jmol.g3d.Xyzd

OV4 - Static variable in class org.jmol.g3d.Xyzd